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bbknnR - Perform Batch Balanced KNN in R
A fast and intuitive batch effect removal tool for single-cell data. BBKNN is originally used in the 'scanpy' python package, and now can be used with 'Seurat' seamlessly.
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cpp
5.42 score 14 stars 38 scripts 654 downloadseasy.utils - Frequently Used Functions for Easy R Programming
Some utility functions for validation and data manipulation. These functions can be helpful to reduce internal codes everywhere in package development.
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3.90 score 1 stars 5 dependents 1 scripts 1.0k downloadshdf5r.Extra - Extensions for 'HDF5' R Interfaces
Some methods to manipulate 'HDF5' files, extending the 'hdf5r' package. Reading and writing R objects to 'HDF5' formats follow the specification of 'AnnData' <https://anndata.readthedocs.io/en/latest/fileformat-prose.html>.
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3.82 score 1 stars 4 dependents 3 scripts 1.1k downloads